• All motifs sorted by activity significance
• All samples sorted alphabetically

• Activities table
• Activity deltas table
• Regulatory interactions
• Motifs sorted by significance (text)

Motif ID: HOX{A4,D4}.p2

Z-value: 1.367

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Top targets:

Promoter	Score	Refseq	Gene Symbol	Gene Name
chr10_+_69487700	31.171		Ank3	ankyrin 3, epithelial
chr5_-_122906470	28.190		Atp2a2	ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
chrX_+_133357268	24.343	NM_011123	Plp1	proteolipid protein (myelin) 1
chr17_+_71168939	23.795		Dlgap1	discs, large (Drosophila) homolog-associated protein 1
chr11_+_56825307	21.677		Gria1	glutamate receptor, ionotropic, AMPA1 (alpha 1)
chr16_+_7069971	21.595		Rbfox1	RNA binding protein, fox-1 homolog (C. elegans) 1
chr11_+_56825258	21.243		Gria1	glutamate receptor, ionotropic, AMPA1 (alpha 1)
chr5_-_122907002	20.888		Atp2a2	ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
chr7_-_107810868	20.027	NM_001163182 NM_013746	Plekhb1	pleckstrin homology domain containing, family B (evectins) member 1
chr12_+_110784600	19.877		Meg3	maternally expressed 3
chr11_+_56825192	19.766	NM_001113325 NM_008165	Gria1	glutamate receptor, ionotropic, AMPA1 (alpha 1)
chr16_+_7069927	19.580	NM_183188	Rbfox1	RNA binding protein, fox-1 homolog (C. elegans) 1
chr12_+_91570569	19.105		Nrxn3	neurexin III
chr12_+_30219769	18.605	NM_001093776	Myt1l	myelin transcription factor 1-like
chr2_+_177910053	18.451	NM_001177791	Phactr3	phosphatase and actin regulator 3
chr4_+_101180625	17.882		Dnajc6	DnaJ (Hsp40) homolog, subfamily C, member 6
chr10_+_69488049	17.857		Ank3	ankyrin 3, epithelial
chr9_-_91255831	17.552		Zic1	zinc finger protein of the cerebellum 1
chr5_+_89012596	17.420	NM_027530	Rufy3	RUN and FYVE domain containing 3
chr13_+_42775991	17.223	NM_198419	Phactr1	phosphatase and actin regulator 1
chr12_+_30213224	16.617	NM_001093775 NM_001093778 NM_008666	Myt1l	myelin transcription factor 1-like
chr13_+_46597271	16.606	NM_026056	Cap2	CAP, adenylate cyclase-associated protein, 2 (yeast)
chr1_-_42724504	15.463		2610017I09Rik	RIKEN cDNA 2610017I09 gene
chr14_+_28689289	15.444		Erc2	ELKS/RAB6-interacting/CAST family member 2
chr13_+_58909254	15.088		Ntrk2	neurotrophic tyrosine kinase, receptor, type 2
chr13_+_42776161	14.886		Phactr1	phosphatase and actin regulator 1
chr7_-_20284370	14.833		Apoe	apolipoprotein E
chr10_-_63552994	14.816	NM_178678	Lrrtm3	leucine rich repeat transmembrane neuronal 3
chr3_+_68376319	14.414		Schip1	schwannomin interacting protein 1
chr5_+_89012537	14.200		Rufy3	RUN and FYVE domain containing 3
chr5_+_89012547	14.164		Rufy3	RUN and FYVE domain containing 3
chr7_-_20284500	14.047	NM_009696	Apoe	apolipoprotein E
chr14_-_109313298	13.931		Slitrk1	SLIT and NTRK-like family, member 1
chr2_+_97306600	13.303
chr3_+_67696141	13.220	NM_001113419 NM_177585	Iqcj-schip1 Iqcj	IQ motif containing J-schwannomin interacting protein 1 read-through transcript IQ motif containing J
chr5_+_90889913	13.205	NM_009654	Alb	albumin
chrX_-_35605544	12.861		Fam70a	family with sequence similarity 70, member A
chr3_+_68376289	12.848	NM_013928	Schip1	schwannomin interacting protein 1
chr5_+_90889937	12.700		Alb	albumin
chr14_-_109313333	12.396		Slitrk1	SLIT and NTRK-like family, member 1
chr14_-_109313447	12.359	NM_199065	Slitrk1	SLIT and NTRK-like family, member 1
chr15_+_4325490	12.219	NM_177355	Plcxd3	phosphatidylinositol-specific phospholipase C, X domain containing 3
chr18_+_61123204	12.050	NM_009792	Camk2a	calcium/calmodulin-dependent protein kinase II alpha
chr18_+_37925233	11.968	NM_033595	Pcdhga12	protocadherin gamma subfamily A, 12
chr16_-_42340613	11.726	NM_008083	Gap43	growth associated protein 43
chr18_+_37834003	11.693		Pcdhga3	protocadherin gamma subfamily A, 3
chr7_+_31092787	11.547		Clip3	CAP-GLY domain containing linker protein 3
chr2_+_61884596	11.544	NM_033552	Slc4a10	solute carrier family 4, sodium bicarbonate cotransporter-like, member 10
chr13_+_58909236	11.479		Ntrk2	neurotrophic tyrosine kinase, receptor, type 2
chr6_-_13785233	11.468		Gpr85	G protein-coupled receptor 85
chrX_+_155897136	11.201		Mtap7d2	MAP7 domain containing 2
chr13_+_58909168	11.136	NM_001025074	Ntrk2	neurotrophic tyrosine kinase, receptor, type 2
chr3_+_114783882	11.111	NM_153157	Olfm3	olfactomedin 3
chr10_-_31410391	11.046		Nkain2	Na+/K+ transporting ATPase interacting 2
chr8_+_12984287	10.696		Mcf2l	mcf.2 transforming sequence-like
chr4_+_101223198	10.614	NM_001164583	Dnajc6	DnaJ (Hsp40) homolog, subfamily C, member 6
chr9_-_73781373	10.570	NM_001081153	Unc13c	unc-13 homolog C (C. elegans)
chr8_+_12949417	10.538	NM_001159485 NM_001159486	Mcf2l	mcf.2 transforming sequence-like
chr18_-_43219062	10.348	NM_028392	Ppp2r2b	protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
chr4_-_60594959	10.323	NM_001122647	Mup10 LOC100048884 Mup1	major urinary protein 10 novel member of the major urinary protein (Mup) gene family major urinary protein 1
chr9_-_49607164	10.172	NM_001081445 NM_001113204 NM_010875	Ncam1	neural cell adhesion molecule 1
chr12_+_110783593	10.008		Meg3	maternally expressed 3
chr6_-_102414660	9.979	NM_008779	Cntn3	contactin 3
chr6_-_92484838	9.963	NM_001134459	Prickle2	prickle homolog 2 (Drosophila)
chr2_+_97307652	9.650	NM_178725	Lrrc4c	leucine rich repeat containing 4C
chr12_+_90191833	9.585	NM_172544	Nrxn3	neurexin III
chr8_-_87461251	9.304	NM_019945	Mast1	microtubule associated serine/threonine kinase 1
chr3_+_17695743	9.259		6430547I21Rik	RIKEN cDNA 6430547I21 gene
chr5_-_84846256	9.156		Epha5	Eph receptor A5
chr11_+_98629709	9.132
chr11_+_87394647	9.129		Sept4	septin 4
chr18_-_32109233	9.092	NM_001025381	Gpr17	G protein-coupled receptor 17
chr13_+_58909632	9.070		Ntrk2	neurotrophic tyrosine kinase, receptor, type 2
chr10_+_126857922	9.038	NM_001168293 NM_027900	R3hdm2	R3H domain containing 2
chr4_+_138012860	9.026		Camk2n1	calcium/calmodulin-dependent protein kinase II inhibitor 1
chr11_+_29607599	9.015		Rtn4	reticulon 4
chr4_-_60889249	8.950	NM_001134674	Mup13 Mup19 Mup1	major urinary protein 13 major urinary protein 19 major urinary protein 1
chr6_+_104443037	8.906	NM_017383	Cntn6	contactin 6
chr12_+_39506844	8.897	NM_007960	Etv1	ets variant gene 1
chr2_-_25325248	8.831	NM_008963	Ptgds	prostaglandin D2 synthase (brain)
chr3_-_146432922	8.816		Prkacb	protein kinase, cAMP dependent, catalytic, beta
chr16_+_96689206	8.694	NM_008791	Pcp4	Purkinje cell protein 4
chr12_+_110806715	8.687		Meg3	maternally expressed 3
chr2_-_25325196	8.606		Ptgds	prostaglandin D2 synthase (brain)
chr15_-_8660729	8.601	NM_148938	Slc1a3	solute carrier family 1 (glial high affinity glutamate transporter), member 3
chr19_+_27291897	8.581		Vldlr	very low density lipoprotein receptor
chr12_+_101447413	8.482		Calm1	calmodulin 1
chr18_+_37925619	8.410		Pcdhga12	protocadherin gamma subfamily A, 12
chr9_-_83003967	8.406
chr16_+_96689373	8.197		Pcp4	Purkinje cell protein 4
chr12_+_118896501	8.158		Rapgef5	Rap guanine nucleotide exchange factor (GEF) 5
chr4_-_109960078	8.156	NM_001038698	Elavl4	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
chrX_-_40627962	8.128	NM_011855	Odz1	odd Oz/ten-m homolog 1 (Drosophila)
chrX_-_35605626	8.105	NM_172930	Fam70a	family with sequence similarity 70, member A
chrX_+_155897056	8.082		Mtap7d2	MAP7 domain containing 2
chr15_-_58614642	7.976		Tmem65	transmembrane protein 65
chr2_-_77357674	7.939	NM_001113400	Zfp385b	zinc finger protein 385B
chr18_-_31476721	7.912	NM_009065	Rit2	Ras-like without CAAX 2
chr12_+_101447480	7.870		Calm1	calmodulin 1
chrX_+_10173557	7.727
chr3_-_146444377	7.674	NM_001164200	Prkacb	protein kinase, cAMP dependent, catalytic, beta
chr3_-_117063793	7.574	NM_177664	D3Bwg0562e	DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed
chr1_-_182123596	7.548	NM_001163290	Adck3	aarF domain containing kinase 3
chrX_-_100381973	7.449	NM_008671	Nap1l2	nucleosome assembly protein 1-like 2
chr18_+_37849488	7.410	NM_033575	Pcdhgb2	protocadherin gamma subfamily B, 2
chr11_+_87394543	7.398		Sept4	septin 4
chr8_+_116729508	7.374	NM_173016	Vat1l	vesicle amine transport protein 1 homolog-like (T. californica)
chr18_+_37979242	7.360		Pcdhgc5	protocadherin gamma subfamily C, 5
chr5_-_121459496	7.217	NM_011286	Rph3a	rabphilin 3A
chr3_-_80606500	7.171		Gria2	glutamate receptor, ionotropic, AMPA2 (alpha 2)
chr9_-_112134984	7.117	NM_001177616	Arpp21	cyclic AMP-regulated phosphoprotein, 21
chr4_-_86876328	7.112	NM_172426	Slc24a2	solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
chr5_+_90890764	7.074		Alb	albumin
chr18_+_37595274	7.069	NM_053137	Pcdhb12	protocadherin beta 12
chr14_-_104213981	7.045
chr11_+_87394609	7.022	NM_011129	Sept4	septin 4
chr15_-_73640331	6.976		Ndufb4	NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4
chr10_+_5151833	6.950	NM_001079686	Syne1	synaptic nuclear envelope 1
chr9_+_21742717	6.948	NM_144935	BC018242	cDNA sequence BC018242
chr13_+_20277293	6.826	NM_080288	Elmo1	engulfment and cell motility 1, ced-12 homolog (C. elegans)
chr1_-_5060365	6.799	NM_001177795	Rgs20	regulator of G-protein signaling 20
chr8_-_87461220	6.740		Mast1	microtubule associated serine/threonine kinase 1
chr16_-_84955488	6.716		App	amyloid beta (A4) precursor protein
chr10_+_59763520	6.695		Psap	prosaposin
chr12_-_32398730	6.631	NM_175191	Gpr22	G protein-coupled receptor 22
chr12_+_109843975	6.620	NM_001163395	Evl	Ena-vasodilator stimulated phosphoprotein
chr19_-_55177562	6.608		Gpam	glycerol-3-phosphate acyltransferase, mitochondrial
chr16_-_84955086	6.542		App	amyloid beta (A4) precursor protein
chr6_+_77193078	6.532		Lrrtm1	leucine rich repeat transmembrane neuronal 1
chr11_-_79317471	6.509		Omg	oligodendrocyte myelin glycoprotein
chr18_+_37979199	6.509	NM_033583	Pcdhgb4 Pcdhgc5	protocadherin gamma subfamily B, 4 protocadherin gamma subfamily C, 5
chr1_+_34364633	6.482		Dst	dystonin
chr15_+_91958558	6.420	NM_007727	Cntn1	contactin 1
chr14_+_65885454	6.408	NM_015795	Fbxo16	F-box protein 16
chr12_+_50484907	6.368		Foxg1	forkhead box G1
chr19_+_8915018	6.213		Bscl2	Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)
chrX_+_132424640	6.197		Bhlhb9	basic helix-loop-helix domain containing, class B9
chr2_+_155215225	6.162		Trp53inp2	transformation related protein 53 inducible nuclear protein 2
chr14_+_66963139	6.150	NM_019675	Stmn4	stathmin-like 4
chr15_-_37389073	6.079	NM_001170867 NM_001170868	Ncald	neurocalcin delta
chr8_+_115093942	6.075	NM_130457	Cntnap4	contactin associated protein-like 4
chr4_+_101180580	6.046	NM_001164584 NM_001164585	Dnajc6	DnaJ (Hsp40) homolog, subfamily C, member 6
chr14_-_31304341	6.000	NM_028981	Cacna1d	calcium channel, voltage-dependent, L type, alpha 1D subunit
chr18_-_31606908	5.981	NM_009308	Syt4	synaptotagmin IV
chr3_+_136598184	5.975		Ppp3ca	protein phosphatase 3, catalytic subunit, alpha isoform
chr16_+_96689322	5.837
chr19_+_56798916	5.800		Adrb1	adrenergic receptor, beta 1
chr6_+_115189004	5.787		Syn2	synapsin II
chr6_+_77192839	5.771		Lrrtm1	leucine rich repeat transmembrane neuronal 1
chr2_-_73498303	5.754	NM_001166604 NM_175752	Chn1	chimerin (chimaerin) 1
chr12_+_110800212	5.751		Meg3	maternally expressed 3
chr10_+_84218792	5.714	NM_001024918	Rfx4	regulatory factor X, 4 (influences HLA class II expression)
chr2_+_59192308	5.697		Pkp4	plakophilin 4
chr18_-_42900793	5.678		Ppp2r2b	protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
chr5_-_139606339	5.678		Prkar1b	protein kinase, cAMP dependent regulatory, type I beta
chr6_+_124948627	5.621	NM_001145926	C530028O21Rik	RIKEN cDNA C530028O21 gene
chr14_-_55613384	5.569	NM_080728	Myh7	myosin, heavy polypeptide 7, cardiac muscle, beta
chr7_+_148817700	5.558		Ap2a2	adaptor protein complex AP-2, alpha 2 subunit
chr2_-_148558110	5.537	NM_019632	Napb	N-ethylmaleimide sensitive fusion protein attachment protein beta
chr3_-_19595395	5.527	NM_205769	Crh	corticotropin releasing hormone
chr6_+_134932018	5.522	NM_001109914	Apold1	apolipoprotein L domain containing 1
chrX_+_20265093	5.499		Cdk16	cyclin-dependent kinase 16
chr7_-_31840647	5.430	NM_019503 NM_052992	Fxyd1	FXYD domain-containing ion transport regulator 1
chr10_+_98486068	5.409		Atp2b1	ATPase, Ca++ transporting, plasma membrane 1
chrX_+_139997806	5.361	NM_008778	Pak3	p21 protein (Cdc42/Rac)-activated kinase 3
chr13_+_83803830	5.352		Mef2c	myocyte enhancer factor 2C
chr14_-_80171003	5.348	NM_001042726 NM_021543	Pcdh8	protocadherin 8
chrX_+_133371611	5.321		Plp1	proteolipid protein (myelin) 1
chr2_-_23904343	5.270		Hnmt	histamine N-methyltransferase
chr5_+_137506122	5.270	NM_001039385	Vgf	VGF nerve growth factor inducible
chr17_-_43803963	5.258	NM_028711	Slc25a27	solute carrier family 25, member 27
chrX_-_100381703	5.252		Nap1l2	nucleosome assembly protein 1-like 2
chr9_-_107571294	5.110		Slc38a3	solute carrier family 38, member 3
chr4_-_136441982	5.100	NM_009777	C1qb	complement component 1, q subcomponent, beta polypeptide
chr12_+_39510297	5.095	NM_001163154	Etv1	ets variant gene 1
chr8_+_56122680	5.066		Gpm6a	glycoprotein m6a
chr3_-_84024766	5.058	NM_030706	Trim2	tripartite motif-containing 2
chr12_+_110783786	5.012		Meg3	maternally expressed 3
chr2_+_20211539	5.004	NM_001081006	Etl4	enhancer trap locus 4
chr18_+_37460452	4.987	NM_053128	Pcdhb3	protocadherin beta 3
chr19_-_7500486	4.973
chr12_-_4344470	4.970		Ncoa1	nuclear receptor coactivator 1
chr6_-_92431385	4.970	NM_001134460	Prickle2	prickle homolog 2 (Drosophila)
chr19_+_27291507	4.960	NM_001161420 NM_013703	Vldlr	very low density lipoprotein receptor
chr7_-_67285104	4.937	NM_001082962	Snrpn	small nuclear ribonucleoprotein N
chr1_-_67085404	4.927	NM_001190984 NM_001190985 NM_021295	Lancl1	LanC (bacterial lantibiotic synthetase component C)-like 1
chr7_-_31840594	4.901		Fxyd1	FXYD domain-containing ion transport regulator 1
chr6_+_58783693	4.876	NM_028705	Herc3	hect domain and RLD 3
chr5_+_89012600	4.873		Rufy3	RUN and FYVE domain containing 3
chrM_+_12383	4.852
chrX_-_161764912	4.851	NM_183427	Glra2	glycine receptor, alpha 2 subunit
chr5_-_115636064	4.835	NM_013879	Cabp1	calcium binding protein 1
chr9_-_107571304	4.799		Slc38a3	solute carrier family 38, member 3
chr1_+_169548381	4.771	NM_001159731	Rxrg	retinoid X receptor gamma
chr9_-_55983967	4.715		Tspan3	tetraspanin 3
chr8_+_114062242	4.642	NM_001168623	Znrf1	zinc and ring finger 1
chr9_-_60535274	4.641	NM_001146047	Lrrc49	leucine rich repeat containing 49
chr3_-_80606704	4.628	NM_001039195 NM_001083806 NM_013540	Gria2	glutamate receptor, ionotropic, AMPA2 (alpha 2)
chr5_+_107926763	4.608	NM_001007574 NM_001168557	A830010M20Rik	RIKEN cDNA A830010M20 gene
chr6_+_8900018	4.602	NM_008751	Nxph1	neurexophilin 1

Nothing significant found in process category.

Gene overrepresentation in compartment category:

Enrichment	P-value	GO Accession	GO Term
1.87	1.17e-07	GO:0000267	cell fraction
2.38	5.49e-07	GO:0045202	synapse
1.95	6.25e-07	GO:0005626	insoluble fraction
1.41	1.27e-06	GO:0071944	cell periphery
1.93	3.56e-06	GO:0005624	membrane fraction
1.39	4.92e-06	GO:0005886	plasma membrane
2.12	1.95e-05	GO:0043005	neuron projection
2.40	9.54e-05	GO:0044297	cell body
1.61	1.04e-04	GO:0005856	cytoskeleton
2.37	1.75e-04	GO:0044456	synapse part
2.39	2.02e-04	GO:0043025	neuronal cell body
2.49	2.18e-04	GO:0030425	dendrite
2.41	1.73e-03	GO:0030424	axon
1.68	2.62e-03	GO:0044430	cytoskeletal part
1.16	1.14e-02	GO:0005737	cytoplasm
1.56	1.50e-02	GO:0042995	cell projection
1.52	2.07e-02	GO:0031090	organelle membrane
2.78	4.16e-02	GO:0043292	contractile fiber

Gene overrepresentation in function category:

Enrichment	P-value	GO Accession	GO Term
1.29	1.34e-05	GO:0005515	protein binding
2.12	1.12e-04	GO:0008092	cytoskeletal protein binding
1.14	7.35e-04	GO:0005488	binding
2.09	4.45e-02	GO:0003779	actin binding